fr.ens.transcriptome.doelan.algorithms
Class DoelanLoadGenepixData

java.lang.Object
  extended byfr.ens.transcriptome.nividic.platform.workflow.Algorithm
      extended byfr.ens.transcriptome.doelan.algorithms.DoelanLoadGenepixData
All Implemented Interfaces:
fr.ens.transcriptome.nividic.platform.module.Module, fr.ens.transcriptome.nividic.platform.workflow.WorkflowListener

public class DoelanLoadGenepixData
extends fr.ens.transcriptome.nividic.platform.workflow.Algorithm
implements fr.ens.transcriptome.nividic.platform.module.Module

This class implements a module witch load GPR and GAL file.

Author:
Laurent Jourdren

Constructor Summary
DoelanLoadGenepixData()
          Public constructor.
 
Method Summary
 fr.ens.transcriptome.nividic.platform.module.AboutModule aboutModule()
          Get the description of the module.
protected  fr.ens.transcriptome.nividic.util.parameter.Parameters defineParameters()
          Set the parameters of the element.
protected  void doIt(fr.ens.transcriptome.nividic.platform.workflow.Container c, fr.ens.transcriptome.nividic.util.parameter.Parameters parameters)
          This method contains all the code to manipulate the container c in this element.
 java.applet.Applet getApplet()
          Get the applet.
 void setApplet(java.applet.Applet applet)
          Set the applet.
 
Methods inherited from class fr.ens.transcriptome.nividic.platform.workflow.Algorithm
addListener, getId, getInstanceId, getLogger, getParameters, in, init, isPause, isStop, out, removeListener, sendEvent, terminate, workflowNewException, workflowStateChanged
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

DoelanLoadGenepixData

public DoelanLoadGenepixData()
                      throws fr.ens.transcriptome.nividic.platform.PlatformException
Public constructor.

Throws:
fr.ens.transcriptome.nividic.platform.PlatformException - If the name or the version of the element is null .
Method Detail

getApplet

public java.applet.Applet getApplet()
Get the applet.

Returns:
Returns the applet.

setApplet

public void setApplet(java.applet.Applet applet)
Set the applet.

Parameters:
applet - The applet to set

aboutModule

public fr.ens.transcriptome.nividic.platform.module.AboutModule aboutModule()
Get the description of the module.

Specified by:
aboutModule in interface fr.ens.transcriptome.nividic.platform.module.Module
Returns:
The description of the module

defineParameters

protected fr.ens.transcriptome.nividic.util.parameter.Parameters defineParameters()
Set the parameters of the element.

Returns:
The defaults parameters to set.

doIt

protected void doIt(fr.ens.transcriptome.nividic.platform.workflow.Container c,
                    fr.ens.transcriptome.nividic.util.parameter.Parameters parameters)
             throws fr.ens.transcriptome.nividic.platform.PlatformException
This method contains all the code to manipulate the container c in this element.

Parameters:
c - The container to be manipulated
parameters - Parameters of the elements
Throws:
fr.ens.transcriptome.nividic.platform.PlatformException - if an error occurs while executing the test.


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