fr.ens.transcriptome.doelan.tests
Class NotFoundFeatureTest

java.lang.Object
  extended byfr.ens.transcriptome.nividic.platform.workflow.Algorithm
      extended byfr.ens.transcriptome.doelan.algorithms.QualityTest
          extended byfr.ens.transcriptome.doelan.algorithms.QualityUnitTest
              extended byfr.ens.transcriptome.doelan.tests.FeatureFlagTest
                  extended byfr.ens.transcriptome.doelan.tests.NotFoundFeatureTest
All Implemented Interfaces:
fr.ens.transcriptome.nividic.platform.module.Module, fr.ens.transcriptome.nividic.platform.workflow.WorkflowListener

public class NotFoundFeatureTest
extends FeatureFlagTest
implements fr.ens.transcriptome.nividic.platform.module.Module

This class define a test based on not found spot flags.

Author:
Laurent Jourdren

Field Summary
 
Fields inherited from class fr.ens.transcriptome.doelan.algorithms.QualityTest
CONFIGURE_TEST_EVENT, GLOBAL_TEST_INIT_EVENT, RESULT_EVENT
 
Constructor Summary
NotFoundFeatureTest()
          Public constructor.
 
Method Summary
 fr.ens.transcriptome.nividic.platform.module.AboutModule aboutModule()
          Get the description of the module.
protected  double getDefaultThreshold()
           
protected  java.lang.String getFlagFilerType()
           
protected  int getFlagFilterValue()
           
 
Methods inherited from class fr.ens.transcriptome.doelan.tests.FeatureFlagTest
defineParameters, test
 
Methods inherited from class fr.ens.transcriptome.doelan.algorithms.QualityUnitTest
doIt, isAddable, isDeletable, isModifiable, isShowable, isUniqueInstance
 
Methods inherited from class fr.ens.transcriptome.nividic.platform.workflow.Algorithm
addListener, getId, getInstanceId, getLogger, getParameters, in, init, isPause, isStop, out, removeListener, sendEvent, terminate, workflowNewException, workflowStateChanged
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

NotFoundFeatureTest

public NotFoundFeatureTest()
                    throws fr.ens.transcriptome.nividic.platform.PlatformException
Public constructor.

Throws:
fr.ens.transcriptome.nividic.platform.PlatformException - If the name or the version of the element is null .
Method Detail

aboutModule

public fr.ens.transcriptome.nividic.platform.module.AboutModule aboutModule()
Get the description of the module.

Specified by:
aboutModule in interface fr.ens.transcriptome.nividic.platform.module.Module
Specified by:
aboutModule in class FeatureFlagTest
Returns:
The description of the module

getFlagFilterValue

protected int getFlagFilterValue()
Specified by:
getFlagFilterValue in class FeatureFlagTest

getFlagFilerType

protected java.lang.String getFlagFilerType()
Specified by:
getFlagFilerType in class FeatureFlagTest

getDefaultThreshold

protected double getDefaultThreshold()
Specified by:
getDefaultThreshold in class FeatureFlagTest


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