Class SampleCountPooledSampleTest
- java.lang.Object
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- fr.ens.biologie.genomique.aozan.tests.pooledsample.AbstractPooledSampleTest
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- fr.ens.biologie.genomique.aozan.tests.pooledsample.AbstractSimpleSampleTest
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- fr.ens.biologie.genomique.aozan.tests.pooledsample.SampleCountPooledSampleTest
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- All Implemented Interfaces:
AozanTest
,PooledSampleTest
public class SampleCountPooledSampleTest extends AbstractSimpleSampleTest
The Class SampleCountSampleTest.- Since:
- 2.4
- Author:
- Sandrine Perrin
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Constructor Summary
Constructors Constructor Description SampleCountPooledSampleTest()
Public constructor.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description List<String>
getCollectorsNamesRequiered()
Get the name of the collectors required for the test.protected String
getKey(int pooledSampleId)
Get the the key in the RunData object for the value to test.protected Class<?>
getValueType()
Get the type of the value.-
Methods inherited from class fr.ens.biologie.genomique.aozan.tests.pooledsample.AbstractSimpleSampleTest
configure, getInterval, isValuePercent, test, testIndexedRead, transformValue
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Methods inherited from class fr.ens.biologie.genomique.aozan.tests.pooledsample.AbstractPooledSampleTest
getColumnName, getDescription, getName, getUnit, init
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Method Detail
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getCollectorsNamesRequiered
public List<String> getCollectorsNamesRequiered()
Description copied from interface:AozanTest
Get the name of the collectors required for the test.- Returns:
- a list of String with the name of the required collectors
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getKey
protected String getKey(int pooledSampleId)
Description copied from class:AbstractSimpleSampleTest
Get the the key in the RunData object for the value to test.- Specified by:
getKey
in classAbstractSimpleSampleTest
- Parameters:
pooledSampleId
- the pooled sample Id- Returns:
- a String with the required key
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getValueType
protected Class<?> getValueType()
Description copied from class:AbstractSimpleSampleTest
Get the type of the value.- Specified by:
getValueType
in classAbstractSimpleSampleTest
- Returns:
- a Class object with the type
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