ExpressionLocalModule (Eoulsan 2.6.1 API)

java.lang.Object
- fr.ens.biologie.genomique.eoulsan.modules.AbstractModule
- - fr.ens.biologie.genomique.eoulsan.modules.expression.AbstractExpressionModule
  - - fr.ens.biologie.genomique.eoulsan.modules.expression.local.ExpressionLocalModule

All Implemented Interfaces:

Module
```
public class ExpressionLocalModule
extends AbstractExpressionModule
```
This class is the module to compute expression in local mode

Since:

1.0

Author:

Laurent Jourdren, Claire Wallon

- Field Summary
  - Fields inherited from class fr.ens.biologie.genomique.eoulsan.modules.expression.AbstractExpressionModule
    COUNTER_GROUP, COUNTER_PARAMETER_NAME, FEATURES_FILE_FORMAT_PARAMETER_NAME, MODULE_NAME, OUTPUT_FILE_FORMAT_PARAMETER_NAME
- Constructor Summary
  
  Constructors
  Constructor Description
  
  ExpressionLocalModule()
- Method Summary
  
  All Methods Instance Methods Concrete Methods
  Modifier and Type Method Description
  
  TaskResult execute(TaskContext context, TaskStatus status)
  Execute a task step.
  - Methods inherited from class fr.ens.biologie.genomique.eoulsan.modules.expression.AbstractExpressionModule
    configure, getDescription, getExpressionCounter, getInputPorts, getName, getOutputPorts, getVersion, isGTFInputFormat, isSAMOutputFormat
  - Methods inherited from class fr.ens.biologie.genomique.eoulsan.modules.AbstractModule
    getChecker, getParallelizationMode, getRequiredEoulsanVersion, getRequirements
  - Methods inherited from class java.lang.Object
    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - ExpressionLocalModule
```
public ExpressionLocalModule()
```
- Method Detail
  - execute
```
public TaskResult execute(TaskContext context,
                          TaskStatus status)
```
    Description copied from interface: Module
    
    Execute a task step.
    
    Parameters:
    
    context - Execution context
    
    status - of the task