Package fr.ens.biologie.genomique.eoulsan.modules.diffana

Enum DiffAna.DispersionMethod

java.lang.Object

java.lang.Enum<DiffAna.DispersionMethod>

fr.ens.biologie.genomique.eoulsan.modules.diffana.DiffAna.DispersionMethod

All Implemented Interfaces:

Serializable, Comparable<DiffAna.DispersionMethod>

Enclosing class:

DiffAna

public static enum DiffAna.DispersionMethod
extends Enum<DiffAna.DispersionMethod>

Dispersion estimation method enum for DESeq differential analysis

Enum Constant Summary

Enum Constants

Enum Constant	Description
BLIND
PER_CONDITION
POOLED

Method Summary

Modifier and Type	Method	Description
static DiffAna.DispersionMethod	getDispEstMethodFromName(String name)	Get the Dispersion estimation method form its name
String	getName()	Get the dispersion estimation method
static DiffAna.DispersionMethod	valueOf(String name)	Returns the enum constant of this type with the specified name.
static DiffAna.DispersionMethod[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

POOLED

public static final DiffAna.DispersionMethod POOLED

PER_CONDITION

public static final DiffAna.DispersionMethod PER_CONDITION

BLIND

public static final DiffAna.DispersionMethod BLIND

Method Detail

values

public static DiffAna.DispersionMethod[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (DiffAna.DispersionMethod c : DiffAna.DispersionMethod.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static DiffAna.DispersionMethod valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getName

public String getName()

Get the dispersion estimation method

Returns:

a string with the dispersion estimation method

getDispEstMethodFromName

public static DiffAna.DispersionMethod getDispEstMethodFromName(String name)

Get the Dispersion estimation method form its name

Parameters:

name - dispersion estimation method name

Returns:

a DispersionMethod or null if no DispersionMethod found for the name