Package fr.ens.biologie.genomique.eoulsan.modules.expression.hadoop
This package contain all the classes related to the expression step in hadoop
mode.
- Since:
- 1.0
-
Class Summary Class Description ExpressionHadoopModule This class is the main class for the expression program of the reads in hadoop mode.ExpressionMapper Mapper for the expression estimation.ExpressionReducer Reducer for the expression estimation.ExpressionSAMOutputMapper Mapper for the expression estimation with a SAM output.PreTreatmentExpressionMapper This class define a mapper for the pretreatment of paired-end data before the expression estimation step.PreTreatmentExpressionReducer This class define a reducer for the pretreatment of paired-end data before the expression estimation step.