160617_NB500892_0097_AH7N2TAFXX run quality report

Sequencer Name: NextSeq NB500892
Sequencer Family: NextSeq
Instrument S/N: NB500892
Run Id: 160617_NB500892_0097_AH7N2TAFXX
Flow cell: H7N2TAFXX
Run started: Fri 17 Jun 2016
Instrument run number: 97
Sequencer Application name: NextSeq Control Software
Sequencer Application version: 2.0.2.1
Sequencer RTA version: 2.4.11
Generated by: Aozan version 2.0-rc19-SNAPSHOT (revision heads/master-0-ge631b27)
Creation date: Thu 22 Sep 2016

Global report

Raw Cluster Est.	Mean Raw Cluster Est.	Median Raw Cluster Est.	Raw Cluster SD Est.	Cluster Density (k/mm2)	PF Cluster Est. (%)	PF Cluster Est.	Mean PF Cluster Est.	Median PF Cluster Est.	PF Cluster SD Est.	PhiX Aligned Est. (%)	PhiX Raw Cluster Est.	Mean PhiX Raw Cluster Est.	Median PhiX Raw Cluster Est.	PhiX Raw Cluster SD Est.	Q30 (%)	Error Rate (%)	Undetermined Cluster Est. (%)	Base Count (Gb)	Non-Indexed Base Count (Gb)	Cycle Count	Lane Count	Sample Count	Project Count
50 636 664	12 659 112	12 656 376	66 528	61.05	96.97%	49 103 352	12 275 784	12 284 280	62 496	4.67%	2 366 424	591 552	597 024	13 680	96.94%	0.16%	10.89%	7.90	7.60	156	4	24	1

Lanes Quality report

Read 1 (75 cycles)

Lane	Raw Cluster Est.	PF Cluster Est.	PF Cluster Est. (%)	Cluster Density (k/mm2)	PhiX Aligned (%)	PhiX Raw Cluster Est.	Q30 (%)	Error Rate (%)	Error Rate 35 Cycle (%)	Error Rate 75 Cycle (%)	Error Rate 100 Cycle (%)	First Cycle Intensity	Cycle 20 Intensity (%)	Phasing / Prephasing
1	12 582 216	12 192 696	96.90%	60.68	4.52%	568 491	97.64%	0.15%	0.10%	0.15%	0.00%	6 020	89.18%	0.083% / 0.197%
2	12 606 552	12 238 416	97.08%	60.80	4.79%	603 907	97.68%	0.15%	0.10%	0.15%	0.00%	6 685	87.39%	0.080% / 0.190%
3	12 706 272	12 342 096	97.13%	61.28	4.69%	595 516	97.77%	0.15%	0.10%	0.15%	0.00%	6 366	88.59%	0.081% / 0.193%
4	12 741 624	12 330 144	96.77%	61.45	4.70%	598 614	97.09%	0.18%	0.11%	0.18%	0.00%	5 267	88.50%	0.089% / 0.187%

Read 2 (6 cycles, index)

Lane	Raw Cluster Est.	PF Cluster Est.	PF Cluster Est. (%)	Cluster Density (k/mm2)	PhiX Aligned (%)	Q30 (%)	Error Rate (%)	Error Rate 35 Cycle (%)	Error Rate 75 Cycle (%)	Error Rate 100 Cycle (%)	First Cycle Intensity	Cycle 20 Intensity (%)	Phasing / Prephasing
1	12 582 216	12 192 696	96.90%	60.68	0.00%	97.57%	0.00%	0.00%	0.00%	0.00%	3 912	0.00%	0.000% / 0.000%
2	12 606 552	12 238 416	97.08%	60.80	0.00%	96.67%	0.00%	0.00%	0.00%	0.00%	4 399	0.00%	0.000% / 0.000%
3	12 706 272	12 342 096	97.13%	61.28	0.00%	97.73%	0.00%	0.00%	0.00%	0.00%	4 000	0.00%	0.000% / 0.000%
4	12 741 624	12 330 144	96.77%	61.45	0.00%	96.47%	0.00%	0.00%	0.00%	0.00%	3 478	0.00%	0.000% / 0.000%

Read 3 (75 cycles)

Lane	Raw Cluster Est.	PF Cluster Est.	PF Cluster Est. (%)	Cluster Density (k/mm2)	PhiX Aligned (%)	PhiX Raw Cluster Est.	Q30 (%)	Error Rate (%)	Error Rate 35 Cycle (%)	Error Rate 75 Cycle (%)	Error Rate 100 Cycle (%)	First Cycle Intensity	Cycle 20 Intensity (%)	Phasing / Prephasing
1	12 582 216	12 192 696	96.90%	60.68	4.46%	561 341	96.62%	0.25%	0.14%	0.25%	0.00%	6 896	87.74%	0.139% / 0.187%
2	12 606 552	12 238 416	97.08%	60.80	4.72%	595 633	96.23%	0.23%	0.13%	0.23%	0.00%	7 488	87.16%	0.142% / 0.186%
3	12 706 272	12 342 096	97.13%	61.28	4.63%	588 556	96.68%	0.23%	0.13%	0.23%	0.00%	6 397	92.05%	0.127% / 0.192%
4	12 741 624	12 330 144	96.77%	61.45	4.63%	589 599	95.72%	0.28%	0.15%	0.28%	0.00%	5 915	89.93%	0.147% / 0.201%

Filter samples data tables

Projects statistics report

Project	Raw Cluster	Min. Raw Cluster	Max. Raw Cluster	Recoverable Raw Cluster (%)	PF Cluster	Min. PF Cluster	Max. PF Cluster	Recoverable PF Cluster (%)	Indexed	FastQ Screen Sample Overcontamination	FastQ Screen Report	Sample Count	Genome(s)	Lane(s)
aozan_demo	45 124 016	1 716 021	2 031 272	1.66%	45 124 016	1 716 021	2 031 272	1.66%	true	0	link	24	Mus Musculus	1,2,3,4

Pooled Samples Quality report (first read only)

Sample name	Description	Index	Project	Sample Count	Raw Cluster	Min. Raw Cluster	Max. Raw Cluster	Raw Cluster Recovery	Recoverable Raw Cluster (%)	Passing Filter (%)	PF Cluster	Min. PF Cluster	Max. PF Cluster	PF Cluster Recovery	Recoverable PF Cluster (%)	Q30 (%)	Sample in Run (%)	Sample in Project (%)	Number of Sample in Pool	Genome(s)	FastQ Screen Sample Overcontamination	FastqScreen Report	FastQ Screen mapped on adapters (%)	FastQ Screen mapped on lsuref (%)	FastQ Screen mapped on ssuref (%)	FastQ Screen mapped on phix (%)	FastQ Screen mapped except. Ref. Genome (%)
cond1rep1	Condition 1	ATCACG	aozan_demo	4	7 148 177	1 776 607	1 805 703	122 661	1.72%	100.00%	7 148 177	1 776 607	1 805 703	122 661	1.72%	97.53%	14.12%	15.84%	4	Mus Musculus	0	link	0.00%	0.62%	0.34%	0.00%	NA
cond1rep2	Condition 1	CGATGT	aozan_demo	4	8 048 697	1 996 979	2 031 272	109 000	1.35%	100.00%	8 048 697	1 996 979	2 031 272	109 000	1.35%	97.33%	15.89%	17.84%	4	Mus Musculus	0	link	0.00%	0.46%	0.51%	0.00%	NA
cond1rep3	Condition 1	TTAGGC	aozan_demo	4	6 909 297	1 716 021	1 745 479	95 660	1.38%	100.00%	6 909 297	1 716 021	1 745 479	95 660	1.38%	97.24%	13.64%	15.31%	4	Mus Musculus	0	link	0.00%	0.75%	1.00%	0.00%	NA
cond2rep1	Condition 2	TGACCA	aozan_demo	4	7 857 958	1 950 508	1 982 511	146 981	1.87%	100.00%	7 857 958	1 950 508	1 982 511	146 981	1.87%	97.51%	15.52%	17.41%	4	Mus Musculus	0	link	0.00%	2.69%	1.99%	0.00%	NA
cond2rep2	Condition 2	ACAGTG	aozan_demo	4	7 381 443	1 829 940	1 862 912	157 889	2.14%	100.00%	7 381 443	1 829 940	1 862 912	157 889	2.14%	97.43%	14.58%	16.36%	4	Mus Musculus	0	link	0.00%	1.00%	0.54%	0.00%	NA
cond2rep3	Condition 2	GCCAAT	aozan_demo	4	7 778 444	1 929 172	1 961 387	115 326	1.48%	100.00%	7 778 444	1 929 172	1 961 387	115 326	1.48%	97.37%	15.36%	17.24%	4	Mus Musculus	0	link	0.00%	1.89%	2.30%	0.00%	NA
undetermined				4	5 512 789	1 317 055	1 456 219	747 517	13.56%	72.19%	3 979 508	942 650	1 044 788	747 517	18.78%	91.46%	10.89%	NA	4		NA	link	0.00%	2.32%	2.34%	41.51%	NA

Samples Quality report

Read 1

Lane	Sample name	Description	Index	Project	Raw Cluster	Passing Filter (%)	PF Cluster	Base PF Mean Quality Score	Q30 (%)	Sample in Lane (%)	Recoverable Raw Cluster	Recoverable PF Cluster	Cluster Recovery Report	Basic Statistics	Per Base Quality Scores	Per Tile Sequence Quality	Per Sequence Quality Scores	Per Base Sequence Content	Per Sequence GC Content	N Content	Sequence Length Distribution	Duplication Level	Overrepresented Sequences	Adapter Content	Kmer Content	Bad Tiles	FastQ Screen mapped on adapters (%)	FastQ Screen mapped on lsuref (%)	FastQ Screen mapped on ssuref (%)	FastQ Screen mapped on phix (%)	FastQ Screen mapped except. Ref. Genome (%)	FastQ Screen Report	Sample name
1	cond1rep1	Condition 1	ATCACG	aozan_demo	1 777 370	100.00%	1 777 370	35.28	98.03%	14.13%	27 706	27 706	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.63%	0.34%	0.00%	0.95%	link	cond1rep1 aozan_demo
1	cond1rep2	Condition 1	CGATGT	aozan_demo	2 007 025	100.00%	2 007 025	35.27	98.00%	15.95%	25 686	25 686	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.46%	0.51%	0.00%	0.96%	link	cond1rep2 aozan_demo
1	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 722 801	100.00%	1 722 801	35.24	97.87%	13.69%	22 493	22 493	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.74%	1.01%	0.00%	1.73%	link	cond1rep3 aozan_demo
1	cond2rep1	Condition 2	TGACCA	aozan_demo	1 960 334	100.00%	1 960 334	35.28	98.05%	15.58%	33 576	33 576	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.69%	1.98%	0.00%	4.61%	link	cond2rep1 aozan_demo
1	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 841 075	100.00%	1 841 075	35.29	98.06%	14.63%	38 265	38 265	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.01%	0.54%	0.00%	1.53%	link	cond2rep2 aozan_demo
1	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 941 505	100.00%	1 941 505	35.27	97.96%	15.43%	27 216	27 216	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.89%	2.30%	0.00%	4.12%	link	cond2rep3 aozan_demo
1	undetermined	No description	undetermined	undetermined	1 332 138	70.76%	942 650	34.28	93.31%	10.59%	174 942	174 942	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.29%	2.32%	41.19%	43.92%	link	undetermined undetermined
2	cond1rep1	Condition 1	ATCACG	aozan_demo	1 776 607	100.00%	1 776 607	35.28	98.04%	14.09%	31 910	31 910	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.63%	0.34%	0.00%	0.96%	link	cond1rep1 aozan_demo
2	cond1rep2	Condition 1	CGATGT	aozan_demo	1 996 979	100.00%	1 996 979	35.27	98.00%	15.84%	27 627	27 627	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.46%	0.51%	0.00%	0.95%	link	cond1rep2 aozan_demo
2	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 716 021	100.00%	1 716 021	35.25	97.91%	13.61%	23 606	23 606	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.76%	0.98%	0.00%	1.72%	link	cond1rep3 aozan_demo
2	cond2rep1	Condition 2	TGACCA	aozan_demo	1 950 508	100.00%	1 950 508	35.28	98.04%	15.47%	38 868	38 868	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.70%	1.98%	0.00%	4.63%	link	cond2rep1 aozan_demo
2	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 829 940	100.00%	1 829 940	35.28	98.05%	14.52%	39 885	39 885	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.00%	0.54%	0.00%	1.53%	link	cond2rep2 aozan_demo
2	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 929 172	100.00%	1 929 172	35.26	97.94%	15.30%	29 291	29 291	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.89%	2.30%	0.00%	4.13%	link	cond2rep3 aozan_demo
2	undetermined	No description	undetermined	undetermined	1 407 377	73.84%	1 039 226	34.43	94.11%	11.16%	191 187	191 187	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.67%	2.67%	41.46%	44.57%	link	undetermined undetermined
3	cond1rep1	Condition 1	ATCACG	aozan_demo	1 805 703	100.00%	1 805 703	35.29	98.09%	14.21%	28 413	28 413	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.62%	0.34%	0.00%	0.95%	link	cond1rep1 aozan_demo
3	cond1rep2	Condition 1	CGATGT	aozan_demo	2 031 272	100.00%	2 031 272	35.28	98.06%	15.99%	25 666	25 666	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.45%	0.50%	0.00%	0.94%	link	cond1rep2 aozan_demo
3	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 745 479	100.00%	1 745 479	35.25	97.90%	13.74%	23 169	23 169	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.74%	1.00%	0.00%	1.72%	link	cond1rep3 aozan_demo
3	cond2rep1	Condition 2	TGACCA	aozan_demo	1 982 511	100.00%	1 982 511	35.30	98.11%	15.60%	33 469	33 469	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.67%	2.01%	0.00%	4.62%	link	cond2rep1 aozan_demo
3	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 862 912	100.00%	1 862 912	35.30	98.13%	14.66%	38 533	38 533	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.01%	0.53%	0.00%	1.52%	link	cond2rep2 aozan_demo
3	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 961 387	100.00%	1 961 387	35.27	98.01%	15.44%	27 430	27 430	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.88%	2.29%	0.00%	4.11%	link	cond2rep3 aozan_demo
3	undetermined	No description	undetermined	undetermined	1 317 055	72.35%	952 844	34.49	94.33%	10.37%	176 680	176 680	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.08%	2.10%	43.73%	46.24%	link	undetermined undetermined
4	cond1rep1	Condition 1	ATCACG	aozan_demo	1 788 497	100.00%	1 788 497	35.17	97.55%	14.04%	34 632	34 632	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.62%	0.34%	0.00%	0.95%	link	cond1rep1 aozan_demo
4	cond1rep2	Condition 1	CGATGT	aozan_demo	2 013 421	100.00%	2 013 421	35.16	97.48%	15.80%	30 021	30 021	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.46%	0.51%	0.00%	0.95%	link	cond1rep2 aozan_demo
4	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 724 996	100.00%	1 724 996	35.11	97.28%	13.54%	26 392	26 392	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.75%	1.00%	0.00%	1.73%	link	cond1rep3 aozan_demo
4	cond2rep1	Condition 2	TGACCA	aozan_demo	1 964 605	100.00%	1 964 605	35.17	97.56%	15.42%	41 068	41 068	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.69%	1.99%	0.00%	4.63%	link	cond2rep1 aozan_demo
4	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 847 516	100.00%	1 847 516	35.18	97.58%	14.50%	41 206	41 206	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.00%	0.54%	0.00%	1.53%	link	cond2rep2 aozan_demo
4	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 946 380	100.00%	1 946 380	35.15	97.45%	15.28%	31 389	31 389	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.89%	2.33%	0.00%	4.15%	link	cond2rep3 aozan_demo
4	undetermined	No description	undetermined	undetermined	1 456 219	71.75%	1 044 788	34.16	92.76%	11.43%	204 708	204 708	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.24%	2.28%	39.64%	42.35%	link	undetermined undetermined
Lane	Sample name	Description	Index	Project	Raw Cluster	Passing Filter (%)	PF Cluster	Base PF Mean Quality Score	Q30 (%)	Sample in Lane (%)	Recoverable Raw Cluster	Recoverable PF Cluster	Cluster Recovery Report	Basic Statistics	Per Base Quality Scores	Per Tile Sequence Quality	Per Sequence Quality Scores	Per Base Sequence Content	Per Sequence GC Content	N Content	Sequence Length Distribution	Duplication Level	Overrepresented Sequences	Adapter Content	Kmer Content	Bad Tiles	FastQ Screen mapped on adapters (%)	FastQ Screen mapped on lsuref (%)	FastQ Screen mapped on ssuref (%)	FastQ Screen mapped on phix (%)	FastQ Screen mapped except. Ref. Genome (%)	FastQ Screen Report	Sample_Project name

Read 2

Lane	Sample name	Description	Index	Project	Raw Cluster	Passing Filter (%)	PF Cluster	Base PF Mean Quality Score	Q30 (%)	Sample in Lane (%)	Recoverable Raw Cluster	Recoverable PF Cluster	Cluster Recovery Report	Basic Statistics	Per Base Quality Scores	Per Tile Sequence Quality	Per Sequence Quality Scores	Per Base Sequence Content	Per Sequence GC Content	N Content	Sequence Length Distribution	Duplication Level	Overrepresented Sequences	Adapter Content	Kmer Content	Bad Tiles	FastQ Screen mapped on adapters (%)	FastQ Screen mapped on lsuref (%)	FastQ Screen mapped on ssuref (%)	FastQ Screen mapped on phix (%)	FastQ Screen mapped except. Ref. Genome (%)	FastQ Screen Report	Sample name
1	cond1rep1	Condition 1	ATCACG	aozan_demo	1 777 370	100.00%	1 777 370	35.15	97.37%	14.13%	27 706	27 706	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.63%	0.34%	0.00%	0.95%	link	cond1rep1 aozan_demo
1	cond1rep2	Condition 1	CGATGT	aozan_demo	2 007 025	100.00%	2 007 025	35.09	97.11%	15.95%	25 686	25 686	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.46%	0.51%	0.00%	0.96%	link	cond1rep2 aozan_demo
1	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 722 801	100.00%	1 722 801	35.08	97.07%	13.69%	22 493	22 493	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.74%	1.01%	0.00%	1.73%	link	cond1rep3 aozan_demo
1	cond2rep1	Condition 2	TGACCA	aozan_demo	1 960 334	100.00%	1 960 334	35.15	97.38%	15.58%	33 576	33 576	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.69%	1.98%	0.00%	4.61%	link	cond2rep1 aozan_demo
1	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 841 075	100.00%	1 841 075	35.11	97.21%	14.63%	38 265	38 265	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.01%	0.54%	0.00%	1.53%	link	cond2rep2 aozan_demo
1	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 941 505	100.00%	1 941 505	35.10	97.17%	15.43%	27 216	27 216	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.89%	2.30%	0.00%	4.12%	link	cond2rep3 aozan_demo
1	undetermined	No description	undetermined	undetermined	1 332 138	70.76%	942 650	33.45	89.43%	10.59%	174 942	174 942	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.29%	2.32%	41.19%	43.92%	link	undetermined undetermined
2	cond1rep1	Condition 1	ATCACG	aozan_demo	1 776 607	100.00%	1 776 607	35.10	97.14%	14.09%	31 910	31 910	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.63%	0.34%	0.00%	0.96%	link	cond1rep1 aozan_demo
2	cond1rep2	Condition 1	CGATGT	aozan_demo	1 996 979	100.00%	1 996 979	35.01	96.68%	15.84%	27 627	27 627	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.46%	0.51%	0.00%	0.95%	link	cond1rep2 aozan_demo
2	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 716 021	100.00%	1 716 021	35.02	96.75%	13.61%	23 606	23 606	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.76%	0.98%	0.00%	1.72%	link	cond1rep3 aozan_demo
2	cond2rep1	Condition 2	TGACCA	aozan_demo	1 950 508	100.00%	1 950 508	35.07	96.99%	15.47%	38 868	38 868	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.70%	1.98%	0.00%	4.63%	link	cond2rep1 aozan_demo
2	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 829 940	100.00%	1 829 940	35.03	96.81%	14.52%	39 885	39 885	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.00%	0.54%	0.00%	1.53%	link	cond2rep2 aozan_demo
2	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 929 172	100.00%	1 929 172	35.05	96.86%	15.30%	29 291	29 291	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.89%	2.30%	0.00%	4.13%	link	cond2rep3 aozan_demo
2	undetermined	No description	undetermined	undetermined	1 407 377	73.84%	1 039 226	33.44	89.34%	11.16%	191 187	191 187	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.67%	2.67%	41.46%	44.57%	link	undetermined undetermined
3	cond1rep1	Condition 1	ATCACG	aozan_demo	1 805 703	100.00%	1 805 703	35.14	97.35%	14.21%	28 413	28 413	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.62%	0.34%	0.00%	0.95%	link	cond1rep1 aozan_demo
3	cond1rep2	Condition 1	CGATGT	aozan_demo	2 031 272	100.00%	2 031 272	35.08	97.06%	15.99%	25 666	25 666	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.45%	0.50%	0.00%	0.94%	link	cond1rep2 aozan_demo
3	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 745 479	100.00%	1 745 479	35.04	96.92%	13.74%	23 169	23 169	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.74%	1.00%	0.00%	1.72%	link	cond1rep3 aozan_demo
3	cond2rep1	Condition 2	TGACCA	aozan_demo	1 982 511	100.00%	1 982 511	35.13	97.33%	15.60%	33 469	33 469	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.67%	2.01%	0.00%	4.62%	link	cond2rep1 aozan_demo
3	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 862 912	100.00%	1 862 912	35.10	97.18%	14.66%	38 533	38 533	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.01%	0.53%	0.00%	1.52%	link	cond2rep2 aozan_demo
3	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 961 387	100.00%	1 961 387	35.08	97.10%	15.44%	27 430	27 430	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.88%	2.29%	0.00%	4.11%	link	cond2rep3 aozan_demo
3	undetermined	No description	undetermined	undetermined	1 317 055	72.35%	952 844	33.74	90.82%	10.37%	176 680	176 680	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.08%	2.10%	43.73%	46.24%	link	undetermined undetermined
4	cond1rep1	Condition 1	ATCACG	aozan_demo	1 788 497	100.00%	1 788 497	35.01	96.70%	14.04%	34 632	34 632	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.62%	0.34%	0.00%	0.95%	link	cond1rep1 aozan_demo
4	cond1rep2	Condition 1	CGATGT	aozan_demo	2 013 421	100.00%	2 013 421	34.91	96.24%	15.80%	30 021	30 021	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.46%	0.51%	0.00%	0.95%	link	cond1rep2 aozan_demo
4	cond1rep3	Condition 1	TTAGGC	aozan_demo	1 724 996	100.00%	1 724 996	34.90	96.22%	13.54%	26 392	26 392	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	0.75%	1.00%	0.00%	1.73%	link	cond1rep3 aozan_demo
4	cond2rep1	Condition 2	TGACCA	aozan_demo	1 964 605	100.00%	1 964 605	34.99	96.61%	15.42%	41 068	41 068	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.69%	1.99%	0.00%	4.63%	link	cond2rep1 aozan_demo
4	cond2rep2	Condition 2	ACAGTG	aozan_demo	1 847 516	100.00%	1 847 516	34.95	96.42%	14.50%	41 206	41 206	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.00%	0.54%	0.00%	1.53%	link	cond2rep2 aozan_demo
4	cond2rep3	Condition 2	GCCAAT	aozan_demo	1 946 380	100.00%	1 946 380	34.95	96.45%	15.28%	31 389	31 389	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	1.89%	2.33%	0.00%	4.15%	link	cond2rep3 aozan_demo
4	undetermined	No description	undetermined	undetermined	1 456 219	71.75%	1 044 788	33.10	87.78%	11.43%	204 708	204 708	link	link	link	link	link	link	link	link	link	link	link	link	link	link	0.00%	2.24%	2.28%	39.64%	42.35%	link	undetermined undetermined
Lane	Sample name	Description	Index	Project	Raw Cluster	Passing Filter (%)	PF Cluster	Base PF Mean Quality Score	Q30 (%)	Sample in Lane (%)	Recoverable Raw Cluster	Recoverable PF Cluster	Cluster Recovery Report	Basic Statistics	Per Base Quality Scores	Per Tile Sequence Quality	Per Sequence Quality Scores	Per Base Sequence Content	Per Sequence GC Content	N Content	Sequence Length Distribution	Duplication Level	Overrepresented Sequences	Adapter Content	Kmer Content	Bad Tiles	FastQ Screen mapped on adapters (%)	FastQ Screen mapped on lsuref (%)	FastQ Screen mapped on ssuref (%)	FastQ Screen mapped on phix (%)	FastQ Screen mapped except. Ref. Genome (%)	FastQ Screen Report	Sample_Project name